Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015794361.1_cds_XP_016438378.1_3318
CDS Infomation

[gene=LOC107764337] [db_xref=GeneID:107764337] [protein=protein RETICULATA-RELATED 5, chloroplastic-like] [protein_id=XP_016438378.1] [location=join(13169..13800,14109..14238,14508..15038,18802..18909,19096..19644,20024..20137,20744..20890)] [gbkey=CDS]
Sequence

ATGAAGGCTCATTCAACAAGCCGTTGTATCTCTTTTAGATCACTTCAACTACACGTTCCA
CCGGCTACTCTACTCCGGCGGAAACTTTTATTCAAAAGACTCAATTTCCACGTCAGCATT
TCAGTCCGTTGTTCGGCCGACGGTACCGATAACTCCCCCGAGGTAATTAACTCCTCCTCT
ACAAGACGTAATGTACTGCTCATGCCTTTACTTACAATCGGAGCTTGTGCTCTCCGGTCG
GCAGTGGCCAGAGCGGACGACAAGCCGCCGCCGGAGAGTACGCCGTCGACTCCGGTGACT
ACAGCGGAGGCTCCGCCGCCTGCTCCGGCGGTTAAGGCGGAGGAAAAGAAAGAGGAAGTG
ATAAATTCGAGGATTTATGATTCGACGGTAATAGGAGAGCCGTTGGCTTTGGGGAAGGAC
AAGAAGAAGGTGTGGGAGAAGCTCATGAATGCTCGGGTTGTGTATTTAGGGGAAGCCGAG
CAAGTTCCTACTCGAGATGATAAGGAATTGGAGCTGGAGATTGTGAAGAATTTGAGGAAG
AGATGCGCTGAAGCAGAGCGACCCATTTCGTTGGCTTTAGAAGCATTTCCCTCTAATTTA
CAACAACAGCTCAATCAATACATGGCTAGAAGGATTGATGGAGAGAGTTTAAAATCTTAT
GTAGCACATTGGCCAACTCAATATTGGCAGGAGTATGAGCCCTTATTGACTTATTGCCGC
GACAATGGGGTTCGGCTGGTCGCATGTGGTTTGCCTCTAGAGGTCCTACGAACAGTTCAA
GCAGAAGGTATTCAGGGGCTTTCAAAAGCTGATCATAAGAAATATGCTCCTCCAGCTGGT
TCAGGTTTCATCTCAGGCTTTACGTCCATGTCACGCAGATCATCCATTGATGTAAATCTG
CTGAACCAGCCTACTCCTTTTGGACCAAGCTCGTATCTCTCTGCACAAGCAAGAGTTGTT
GAGGAGTACAATATGTCCCAGATAGTTTTACAAGCAGTGGTGGATGATGGAGCAGCTGGT
ATGTTTGTTGTTGTCACAGGTGCTACCCATGTCATGTATGGATCAAGAGGGACTGGAGTG
CCTGCTAGAATTTCAAGGAAGATACAAAAGAAAAATCAAATTGTCGTACTACTTGACCCT
GAAAGACAATGGCTAAGGAGGGAGGGAGAAGTTCCTGTTGCTGATTTCTTGTGGTACTCT
GCAGCTAGACCTTGTAGCAGAAATTGTTTTGATCGTGCAGAAATTGCCCGTGTGATGAAT
GCAGCTGGCAGGAGGCGAGATGCCTTACCTCAGGATCTTCAAAATGGATTAGATCGTGGT
CTGGTGTCTCCGGAAGTGCTGCAGAACTTTTTTGATCTAGAGCAATATCCCTTCATTTCA
GAGTTAACTCATCGCTTTCAGGGTTTTAGAGAGAGATTGTTGGCCGATCCTAAATTTCTA
CATCGATTAGCTATTGAAGAAAGTATATCAATAACAACAACTCTCTTGGCACAGTATGAG
AAGCGTAGAGAAAATTTCTTTGAAGAGCTTGATTATGTTATTACAGACACTGCCAGGGGT
ATAGTTGTGGATTTTTTCACTGTGTGGCTTCCTGCTCCAACGATTTCTTTCTTGCCAGTT
GCTGATGATGTTGATGCGCCTAAGAGTGTGGAAGCATTGAAAGGCCTCCTGGGTTCTATC
CCAGATAATGCTTTTCAGAAAAGTCTTGTTGGGAAGGATTGGAATGTGAGCCACAGAGTT
GCGTCTGTGTTTGTTGGTGGCCTTAAATTGGCCGGTGTAGGATTTATTTCTAGCATCGGC
GCAGTGGCTTCATCAAATATCTTGTATGCAATACGCAAAGCATTAAATCCGACCTTTACT
ACTGTCCAAAAGAACAAGCGGTCTCCAATACTGAAAACAGCGCTTGTGTATTCATCATTT
CTTGGTACATCGGCAAATCTACGGTATCAGGTTATTGCAGGATTAGTAGAACACAGGATT
GCAGATCAATTAGCGGACCAAACGTTACTTGTAAATATGCTATCTTTTGTTGTTCGAACG
ATCAACTCCTACTGGGGAACCCAGCAATGGATCGACCTCGCACGGCTTACAGGATTGCAG
GCTCAGAAGAGTGAGCAAGTTTCGGATCTTGCTCCAGATTCTGCAAATCCTGCTGCCGTT
GGTTGCAATACACCAGAAGATACCAATATTGACGAAATCAACAAGCAATAG

Peptide Sequence

PEP ID

XP_016438378.1
PEP Infomation

PREDICTED: protein RETICULATA-RELATED 5, chloroplastic-like [Nicotiana tabacum]
Sequence

MKAHSTSRCISFRSLQLHVPPATLLRRKLLFKRLNFHVSISVRCSADGTDNSPEVINSSS
TRRNVLLMPLLTIGACALRSAVARADDKPPPESTPSTPVTTAEAPPPAPAVKAEEKKEEV
INSRIYDSTVIGEPLALGKDKKKVWEKLMNARVVYLGEAEQVPTRDDKELELEIVKNLRK
RCAEAERPISLALEAFPSNLQQQLNQYMARRIDGESLKSYVAHWPTQYWQEYEPLLTYCR
DNGVRLVACGLPLEVLRTVQAEGIQGLSKADHKKYAPPAGSGFISGFTSMSRRSSIDVNL
LNQPTPFGPSSYLSAQARVVEEYNMSQIVLQAVVDDGAAGMFVVVTGATHVMYGSRGTGV
PARISRKIQKKNQIVVLLDPERQWLRREGEVPVADFLWYSAARPCSRNCFDRAEIARVMN
AAGRRRDALPQDLQNGLDRGLVSPEVLQNFFDLEQYPFISELTHRFQGFRERLLADPKFL
HRLAIEESISITTTLLAQYEKRRENFFEELDYVITDTARGIVVDFFTVWLPAPTISFLPV
ADDVDAPKSVEALKGLLGSIPDNAFQKSLVGKDWNVSHRVASVFVGGLKLAGVGFISSIG
AVASSNILYAIRKALNPTFTTVQKNKRSPILKTALVYSSFLGTSANLRYQVIAGLVEHRI
ADQLADQTLLVNMLSFVVRTINSYWGTQQWIDLARLTGLQAQKSEQVSDLAPDSANPAAV
GCNTPEDTNIDEINKQ

Transcript Sequence

Gene sequence data has not been registered.